Spov3_chr1.04597

Description : not classified

Gene families : OG0000862 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000862_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr1.04597
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_124

Target	Alias	Description	ECC score	Gene Family Method
Spov3_chr1.04506	ATCYSC1,...	not classified	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01387	ATCYSC1,...	not classified	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.04563	ATCYSC1,...	not classified	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.00776	ATCYSC1,...	not classified	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02360	No alias	not classified	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004649	poly(ADP-ribose) glycohydrolase activity	IEA	Interproscan
BP	GO:0006282	regulation of DNA repair	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051052	regulation of DNA metabolic process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0030599	pectinesterase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0042545	cell wall modification	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0042887	amide transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0045229	external encapsulating structure organization	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071554	cell wall organization or biogenesis	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071555	cell wall organization	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:1904680	peptide transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR046372	PARG_cat_C	21	68

External Links

No external refs found!