Spov3_chr1.03670 (HTA1, RAT5, ATHTA1)


Aliases : HTA1, RAT5, ATHTA1

Description : histone *(H2A)


Gene families : OG0000597 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000597_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.03670
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_50


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0000278 mitotic cell cycle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0000775 chromosome, centromeric region IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0000786 nucleosome IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003774 cytoskeletal motor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003777 microtubule motor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004743 pyruvate kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006275 regulation of DNA replication IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006302 double-strand break repair IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007017 microtubule-based process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007018 microtubule-based movement IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007049 cell cycle IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008017 microtubule binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008092 cytoskeletal protein binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030955 potassium ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0031420 alkali metal ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051052 regulation of DNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0098687 chromosomal region IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 93 125
IPR007125 Histone_H2A/H2B/H3 13 90
No external refs found!