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Aliases : NEF1
Description : exine patterning factor *(NEF1)
Gene families : OG0011943 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra008832 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_252 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000502 | proteasome complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004659 | prenyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005048 | signal sequence binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005801 | cis-Golgi network | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006605 | protein targeting | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006612 | protein targeting to membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006621 | protein retention in ER lumen | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006873 | intracellular monoatomic ion homeostasis | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006874 | intracellular calcium ion homeostasis | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006886 | intracellular protein transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008104 | protein localization | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008312 | 7S RNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008318 | protein prenyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009894 | regulation of catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009966 | regulation of signal transduction | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010646 | regulation of cell communication | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015031 | protein transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016311 | dephosphorylation | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0018342 | protein prenylation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019725 | cellular homeostasis | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0023051 | regulation of signaling | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0030003 | intracellular monoatomic cation homeostasis | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0030120 | vesicle coat | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0030127 | COPII vesicle coat | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0032182 | ubiquitin-like protein binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0032469 | endoplasmic reticulum calcium ion homeostasis | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0033036 | macromolecule localization | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0033218 | amide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0033365 | protein localization to organelle | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042176 | regulation of protein catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0042277 | peptide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042592 | homeostatic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0043130 | ubiquitin binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0045047 | protein targeting to ER | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0045184 | establishment of protein localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0045185 | maintenance of protein location | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046907 | intracellular transport | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0046923 | ER retention sequence binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0048500 | signal recognition particle | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0048583 | regulation of response to stimulus | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0048878 | chemical homeostasis | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0050801 | monoatomic ion homeostasis | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051235 | maintenance of location | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051641 | cellular localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051649 | establishment of localization in cell | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051651 | maintenance of location in cell | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051668 | localization within membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0055074 | calcium ion homeostasis | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0055080 | monoatomic cation homeostasis | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0055082 | intracellular chemical homeostasis | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071702 | organic substance transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071705 | nitrogen compound transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072657 | protein localization to membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0097354 | prenylation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1905368 | peptidase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1905369 | endopeptidase complex | IEP | Brassica rapa GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |