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  5. Spov3_chr1.02185

Spov3_chr1.02185 (VLN1, ATVLN1)


Aliases : VLN1, ATVLN1

Description : not classified


Gene families : OG0003797 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003797_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.02185
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Spov3_S11.00010 VLN1, ATVLN1 villin actin-crosslinking factor 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02501 VLN1, ATVLN1 villin actin-crosslinking factor 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02998 VLN1, ATVLN1 villin actin-crosslinking factor 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009966 regulation of signal transduction IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010646 regulation of cell communication IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0023051 regulation of signaling IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032012 regulation of ARF protein signal transduction IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043226 organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046578 regulation of Ras protein signal transduction IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048583 regulation of response to stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0070001 aspartic-type peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1902531 regulation of intracellular signal transduction IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!