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  5. Bra008763

Bra008763


Description : CMF transcription factor


Gene families : OG0004451 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004451_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra008763
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_242

Target Alias Description ECC score Gene Family Method Actions
Bra023461 No alias CMF transcription factor 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0009055 electron transfer activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003968 RNA-dependent RNA polymerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004356 glutamine synthetase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004668 protein-arginine deiminase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004673 protein histidine kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006541 glutamine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006542 glutamine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006576 biogenic amine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006595 polyamine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006596 polyamine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006790 sulfur compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006810 transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008374 O-acyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009064 glutamine family amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009308 amine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009309 amine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009445 putrescine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009446 putrescine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016211 ammonia ligase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016226 iron-sulfur cluster assembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031163 metallo-sulfur cluster assembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0034062 5'-3' RNA polymerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042401 biogenic amine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051179 localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097747 RNA polymerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140299 small molecule sensor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901607 alpha-amino acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003245 Phytocyanin_dom 422 498
IPR010402 CCT_domain 286 322
No external refs found!