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  5. Spov3_chr1.01269

Spov3_chr1.01269 (PKDM7D, JMJ16)


Aliases : PKDM7D, JMJ16

Description : histone demethylase *(PKDM7)


Gene families : OG0002250 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002250_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.01269
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_154


Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005488 binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006631 fatty acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032787 monocarboxylic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044255 cellular lipid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051287 NAD binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0070403 NAD+ binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003347 JmjC_dom 414 530
IPR004198 Znf_C5HC2 637 687
IPR003349 JmjN 181 214
IPR003889 FYrich_C 1074 1160
IPR003888 FYrich_N 1020 1067
No external refs found!