Aliases : PPR30
Description : not classified
Gene families : OG0070399 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr1.00767 | |
Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_171 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0003674 | molecular_function | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0003689 | DNA clamp loader activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0004055 | argininosuccinate synthase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0004175 | endopeptidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0005488 | binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0005524 | ATP binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
CC | GO:0005663 | DNA replication factor C complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006082 | organic acid metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006188 | IMP biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006189 | 'de novo' IMP biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006260 | DNA replication | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006265 | DNA topological change | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006399 | tRNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006520 | amino acid metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006525 | arginine metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006526 | arginine biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0008033 | tRNA processing | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0008170 | N-methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0008270 | zinc ion binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0008483 | transaminase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0016070 | RNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016853 | isomerase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016874 | ligase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016887 | ATP hydrolysis activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0017076 | purine nucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0018208 | peptidyl-proline modification | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0031047 | regulatory ncRNA-mediated gene silencing | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0032553 | ribonucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0034660 | ncRNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0036094 | small molecule binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0043038 | amino acid activation | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0043039 | tRNA aminoacylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0043167 | ion binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0043168 | anion binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0043170 | macromolecule metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0043436 | oxoacid metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0044238 | primary metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0044281 | small molecule metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0046040 | IMP metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0046483 | heterocycle metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0046914 | transition metal ion binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0071103 | DNA conformation change | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0071704 | organic substance metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0097159 | organic cyclic compound binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0140299 | small molecule sensor activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0140612 | DNA damage sensor activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0140657 | ATP-dependent activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0140664 | ATP-dependent DNA damage sensor activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:1901363 | heterocyclic compound binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_rpt | 267 | 291 |
IPR002885 | Pentatricopeptide_rpt | 535 | 563 |
IPR002885 | Pentatricopeptide_rpt | 638 | 666 |
IPR002885 | Pentatricopeptide_rpt | 604 | 632 |
IPR002885 | Pentatricopeptide_rpt | 325 | 355 |
IPR002885 | Pentatricopeptide_rpt | 709 | 737 |
IPR002885 | Pentatricopeptide_rpt | 673 | 700 |
IPR002885 | Pentatricopeptide_rpt | 743 | 772 |
IPR002885 | Pentatricopeptide_rpt | 502 | 527 |
IPR002885 | Pentatricopeptide_rpt | 430 | 460 |
IPR002885 | Pentatricopeptide_rpt | 357 | 402 |
IPR002885 | Pentatricopeptide_rpt | 195 | 242 |
IPR002885 | Pentatricopeptide_rpt | 778 | 817 |
No external refs found! |