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  5. Spov3_chr1.00199

Spov3_chr1.00199


Description : not classified


Gene families : OG0068576 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.00199
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_116


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000387 spliceosomal snRNP assembly IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003916 DNA topoisomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004252 serine-type endopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005488 binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006265 DNA topological change IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0022618 protein-RNA complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071103 DNA conformation change IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071826 protein-RNA complex organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 509 540
IPR002885 Pentatricopeptide_rpt 442 491
IPR002885 Pentatricopeptide_rpt 129 176
IPR002885 Pentatricopeptide_rpt 547 596
IPR002885 Pentatricopeptide_rpt 197 246
IPR002885 Pentatricopeptide_rpt 621 654
IPR002885 Pentatricopeptide_rpt 373 421
IPR002885 Pentatricopeptide_rpt 302 351
No external refs found!