- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : not classified
Gene families : OG0000028 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000028_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_C0857.00005 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_141 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_C0037.00015 | No alias | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0367.00001 | No alias | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0491.00013 | ATCKX3, CKX3 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0514.00002 | No alias | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0684.00001 | No alias | not classified | 0.15 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0732.00003 | No alias | not classified | 0.15 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0898.00005 | No alias | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1275.00001 | No alias | not classified | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1352.00002 | No alias | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005739 | mitochondrion | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006487 | protein N-linked glycosylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006811 | monoatomic ion transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006812 | monoatomic cation transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0008250 | oligosaccharyltransferase complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0009523 | photosystem II | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0034998 | oligosaccharyltransferase I complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0098796 | membrane protein complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1902600 | proton transmembrane transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |