Spov3_C0336.00003 (CBF4, DREB1D)

Aliases : CBF4, DREB1D

Description : subgroup ERF-III transcription factor. transcription factor *(CBF/DREB1)

Gene families : OG0002410 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002410_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_C0336.00003
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_76

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_9_53921.1	CBF4, DREB1D	transcription factor *(CBF/DREB1). subgroup ERF-III...	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001727	lipid kinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003824	catalytic activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004143	ATP-dependent diacylglycerol kinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004497	monooxygenase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004568	chitinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005506	iron ion binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005509	calcium ion binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005543	phospholipid binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005783	endoplasmic reticulum	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006022	aminoglycan metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006026	aminoglycan catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006030	chitin metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006032	chitin catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006040	amino sugar metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0007205	protein kinase C-activating G protein-coupled receptor signaling pathway	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008037	cell recognition	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008061	chitin binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008171	O-methyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008289	lipid binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009605	response to external stimulus	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009607	response to biotic stimulus	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009617	response to bacterium	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009620	response to fungus	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015035	protein-disulfide reductase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016670	oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016740	transferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016757	glycosyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016972	thiol oxidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034975	protein folding in endoplasmic reticulum	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0042742	defense response to bacterium	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0043167	ion binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043207	response to external biotic stimulus	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046348	amino sugar catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048544	recognition of pollen	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0050832	defense response to fungus	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051707	response to other organism	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0071949	FAD binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0098542	defense response to other organism	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	38	88

External Links

No external refs found!

Spov3_C0336.00003 (CBF4, DREB1D)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation