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  5. Lsat_1_v5_gn_9_81160.1

Lsat_1_v5_gn_9_81160.1 (ECR1)


Aliases : ECR1

Description : large subunit *(ECR1) of E1 RUB ubiquitin-activating enzyme complex


Gene families : OG0034537 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_81160.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_219


Type GO Term Name Evidence Source
MF GO:0019781 NEDD8 activating enzyme activity IEA Interproscan
BP GO:0045116 protein neddylation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003724 RNA helicase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003972 RNA ligase (ATP) activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004177 aminopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004484 mRNA guanylyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004619 phosphoglycerate mutase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004721 phosphoprotein phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004813 alanine-tRNA ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005488 binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005669 transcription factor TFIID complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006370 7-methylguanosine mRNA capping IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006401 RNA catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006402 mRNA catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006419 alanyl-tRNA aminoacylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006906 vesicle fusion IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007030 Golgi organization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008186 ATP-dependent activity, acting on RNA IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008192 RNA guanylyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008452 RNA ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009452 7-methylguanosine RNA capping IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009890 negative regulation of biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009892 negative regulation of metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009966 regulation of signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010646 regulation of cell communication IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016050 vesicle organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016311 dephosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019439 aromatic compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0023051 regulation of signaling IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031011 Ino80 complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031090 organelle membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031324 negative regulation of cellular metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032012 regulation of ARF protein signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0035145 exon-exon junction complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0036260 RNA capping IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042393 histone binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046578 regulation of Ras protein signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048284 organelle fusion IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048583 regulation of response to stimulus IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050080 malonyl-CoA decarboxylase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0061024 membrane organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0061025 membrane fusion IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070568 guanylyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0070603 SWI/SNF superfamily-type complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0090174 organelle membrane fusion IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0097346 INO80-type complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901264 carbohydrate derivative transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1902531 regulation of intracellular signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1904949 ATPase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000594 ThiF_NAD_FAD-bd 33 332
IPR014929 E2-binding 342 402
No external refs found!