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Aliases : ftsh9
Description : RNA polymerase nuclear import factor *(RIMA)
Gene families : OG0035476 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_78801.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_219 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003684 | damaged DNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003743 | translation initiation factor activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005667 | transcription regulator complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006413 | translational initiation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006486 | protein glycosylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008417 | fucosyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010468 | regulation of gene expression | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010498 | proteasomal protein catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016579 | protein deubiquitination | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019781 | NEDD8 activating enzyme activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0030163 | protein catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0042393 | histone binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043413 | macromolecule glycosylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043687 | post-translational protein modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0045116 | protein neddylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0050789 | regulation of biological process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0050794 | regulation of cellular process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0065007 | biological regulation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0101005 | deubiquitinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007308 | Rtr1/RPAP2_dom | 28 | 102 |
| No external refs found! |