1. Home
  2. Species
  3. Lactuca sativa
  4. Sequence
  5. Lsat_1_v5_gn_9_47501.1

Lsat_1_v5_gn_9_47501.1 (SBA1, ATAD3A1)


Aliases : SBA1, ATAD3A1

Description : regulatory protein *(SBA) of mitochondrial nucleoid organization


Gene families : OG0000933 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000933_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_47501.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_179


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006400 tRNA modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009451 RNA modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016763 pentosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030684 preribosome IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0032040 small-subunit processome IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043226 organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR021911 ATAD3_N 45 311
IPR003959 ATPase_AAA_core 379 505
No external refs found!