Bra007665 (VGDH2)

Aliases : VGDH2

Description : EC_3.1 hydrolase acting on ester bond. pectin methylesterase

Gene families : OG0007875 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra007665
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_14

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004857	enzyme inhibitor activity	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140678	molecular function inhibitor activity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006720	isoprenoid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008200	ion channel inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016247	channel regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016248	channel inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0017080	sodium channel regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019871	sodium channel inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0099106	ion channel regulator activity	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	262	555
IPR006501	Pectinesterase_inhib_dom	33	179

External Links

No external refs found!