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Aliases : SHOU4
Description : not classified
Gene families : OG0007667 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_69060.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_22 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bra026021 | SHOU4L | regulatory protein *(SHOU4) involved in cellulose... | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003684 | damaged DNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003824 | catalytic activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004356 | glutamine synthetase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005575 | cellular_component | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005795 | Golgi stack | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005856 | cytoskeleton | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005885 | Arp2/3 protein complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006325 | chromatin organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006334 | nucleosome assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006338 | chromatin remodeling | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006541 | glutamine metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006542 | glutamine biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0007015 | actin filament organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008455 | alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010498 | proteasomal protein catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0015629 | actin cytoskeleton | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0016020 | membrane | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016043 | cellular component organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016211 | ammonia ligase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016757 | glycosyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016758 | hexosyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016759 | cellulose synthase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030127 | COPII vesicle coat | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0030163 | protein catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0030243 | cellulose metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0031984 | organelle subcompartment | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0032993 | protein-DNA complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034314 | Arp2/3 complex-mediated actin nucleation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034728 | nucleosome organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0045010 | actin nucleation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0071824 | protein-DNA complex organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0097435 | supramolecular fiber organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0098791 | Golgi apparatus subcompartment | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0110165 | cellular anatomical entity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |