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  5. Lsat_1_v5_gn_8_3521.1

Lsat_1_v5_gn_8_3521.1 (PKDM7D, JMJ16)


Aliases : PKDM7D, JMJ16

Description : histone demethylase *(PKDM7)


Gene families : OG0004856 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004856_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_3521.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_138


Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005484 SNAP receptor activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015036 disulfide oxidoreductase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016409 palmitoyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016972 thiol oxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030674 protein-macromolecule adaptor activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0060090 molecular adaptor activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003347 JmjC_dom 356 472
IPR004198 Znf_C5HC2 579 630
IPR003889 FYrich_C 831 915
IPR003888 FYrich_N 782 824
IPR003349 JmjN 126 159
No external refs found!