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  5. Lsat_1_v5_gn_8_30781.1

Lsat_1_v5_gn_8_30781.1 (SHD, HSP90, HSP90.7,...)


Aliases : SHD, HSP90, HSP90.7, AtHsp90-7, AtHsp90.7

Description : chaperone *(Hsp90)


Gene families : OG0004940 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004940_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_30781.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Bra013774 SHD, HSP90,... chaperone *(Hsp90) 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03417 SHD, HSP90,... chaperone *(Hsp90) 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
MF GO:0140662 ATP-dependent protein folding chaperone IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005783 endoplasmic reticulum IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031012 extracellular matrix IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043226 organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003594 HATPase_C 101 256
IPR001404 Hsp90_fam 259 799
No external refs found!