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  5. Bra007284

Bra007284 (CRD1, ACSF, CHL27)


Aliases : CRD1, ACSF, CHL27

Description : protein S-acyltransferase *(PAT1-9). catalytic component *(CRD1) of Mg-protoporphyrin IX monomethylester cyclase complex


Gene families : OG0001221 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra007284
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_237

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_9_30221.1 CRD1, ACSF, CHL27 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Mp5g03060.1 CRD1, ACSF, CHL27 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0088.00001 CRD1, ACSF, CHL27 catalytic component *(CRD1) of Mg-protoporphyrin IX... 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0016409 palmitoyltransferase activity IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005216 monoatomic ion channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005261 monoatomic cation channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005956 protein kinase CK2 complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006090 pyruvate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006091 generation of precursor metabolites and energy IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006096 glycolytic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006163 purine nucleotide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006164 purine nucleotide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006753 nucleoside phosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006754 ATP biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009117 nucleotide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009141 nucleoside triphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009150 purine ribonucleotide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009165 nucleotide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009259 ribonucleotide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009260 ribonucleotide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0009507 chloroplast IEP Brassica rapa GO terms from Neighborhoods
CC GO:0009521 photosystem IEP Brassica rapa GO terms from Neighborhoods
CC GO:0009522 photosystem I IEP Brassica rapa GO terms from Neighborhoods
CC GO:0009523 photosystem II IEP Brassica rapa GO terms from Neighborhoods
CC GO:0009536 plastid IEP Brassica rapa GO terms from Neighborhoods
CC GO:0009538 photosystem I reaction center IEP Brassica rapa GO terms from Neighborhoods
CC GO:0009654 photosystem II oxygen evolving complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009767 photosynthetic electron transport chain IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010109 regulation of photosynthesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010207 photosystem II assembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0010242 oxygen evolving activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015078 proton transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015252 proton channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015267 channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015979 photosynthesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015986 proton motive force-driven ATP synthesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016830 carbon-carbon lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016832 aldehyde-lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016851 magnesium chelatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016854 racemase and epimerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Brassica rapa GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019207 kinase regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019637 organophosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019693 ribose phosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019887 protein kinase regulator activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0019898 extrinsic component of membrane IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022803 passive transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022900 electron transport chain IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030145 manganese ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032787 monocarboxylic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042548 regulation of photosynthesis, light reaction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042549 photosystem II stabilization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Brassica rapa GO terms from Neighborhoods
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046034 ATP metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046390 ribose phosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051287 NAD binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072521 purine-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072522 purine-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090407 organophosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901135 carbohydrate derivative metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1902554 serine/threonine protein kinase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1902911 protein kinase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1990204 oxidoreductase complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003251 Rr_diiron-bd_dom 562 695
IPR001594 Palmitoyltrfase_DHHC 82 207
No external refs found!