- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : ATRMA1, RMA1
Description : E3 ubiquitin ligase *(RMA/MUSE)
Gene families : OG0042473 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_133141.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_25 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003830 | beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005576 | extracellular region | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005618 | cell wall | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006073 | obsolete cellular glucan metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006468 | protein phosphorylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006487 | protein N-linked glycosylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010215 | cellulose microfibril organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010468 | regulation of gene expression | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015020 | glucuronosyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016567 | protein ubiquitination | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016740 | transferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016755 | aminoacyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016757 | glycosyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016758 | hexosyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019222 | regulation of metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0030198 | extracellular matrix organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0030246 | carbohydrate binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030312 | external encapsulating structure | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0036211 | protein modification process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043062 | extracellular structure organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043412 | macromolecule modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046527 | glucosyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0048046 | apoplast | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0050789 | regulation of biological process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0050794 | regulation of cellular process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0065007 | biological regulation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140110 | transcription regulator activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |