Coexpression cluster: Cluster_25 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016757 glycosyltransferase activity 10.69% (17/159) 3.01 0.0 0.0
GO:0016740 transferase activity 24.53% (39/159) 1.59 0.0 0.0
GO:0016762 xyloglucan:xyloglucosyl transferase activity 4.4% (7/159) 5.38 0.0 0.0
GO:0048046 apoplast 4.4% (7/159) 5.38 0.0 0.0
GO:0005618 cell wall 4.4% (7/159) 5.38 0.0 0.0
GO:0006073 obsolete cellular glucan metabolic process 4.4% (7/159) 5.38 0.0 0.0
GO:0005576 extracellular region 4.4% (7/159) 5.16 0.0 0.0
GO:0065007 biological regulation 15.09% (24/159) 2.1 0.0 0.0
GO:0030312 external encapsulating structure 4.4% (7/159) 4.99 0.0 0.0
GO:0016758 hexosyltransferase activity 6.29% (10/159) 3.71 0.0 0.0
GO:0050789 regulation of biological process 14.47% (23/159) 2.05 0.0 0.0
GO:0046527 glucosyltransferase activity 5.03% (8/159) 4.1 0.0 0.0
GO:0003700 DNA-binding transcription factor activity 8.18% (13/159) 2.75 0.0 1e-06
GO:0140110 transcription regulator activity 8.18% (13/159) 2.69 0.0 2e-06
GO:0050794 regulation of cellular process 13.21% (21/159) 1.94 0.0 2e-06
GO:0004842 ubiquitin-protein transferase activity 4.4% (7/159) 3.87 1e-06 8e-06
GO:0008150 biological_process 38.99% (62/159) 0.84 1e-06 9e-06
GO:0019787 ubiquitin-like protein transferase activity 4.4% (7/159) 3.81 1e-06 9e-06
GO:0016755 aminoacyltransferase activity 4.4% (7/159) 3.75 1e-06 1.2e-05
GO:0051252 regulation of RNA metabolic process 9.43% (15/159) 2.07 3e-06 3.4e-05
GO:0006355 regulation of DNA-templated transcription 9.43% (15/159) 2.08 3e-06 3.4e-05
GO:2001141 regulation of RNA biosynthetic process 9.43% (15/159) 2.08 3e-06 3.4e-05
GO:0019219 regulation of nucleobase-containing compound metabolic process 9.43% (15/159) 2.06 4e-06 3.5e-05
GO:0010468 regulation of gene expression 9.43% (15/159) 2.03 5e-06 3.7e-05
GO:0009889 regulation of biosynthetic process 9.43% (15/159) 2.03 5e-06 3.7e-05
GO:0010556 regulation of macromolecule biosynthetic process 9.43% (15/159) 2.03 5e-06 3.7e-05
GO:0031326 regulation of cellular biosynthetic process 9.43% (15/159) 2.03 5e-06 3.7e-05
GO:0080090 regulation of primary metabolic process 9.43% (15/159) 2.01 6e-06 4.4e-05
GO:0051171 regulation of nitrogen compound metabolic process 9.43% (15/159) 2.01 6e-06 4.4e-05
GO:0060255 regulation of macromolecule metabolic process 9.43% (15/159) 1.98 7e-06 5e-05
GO:0031323 regulation of cellular metabolic process 9.43% (15/159) 1.98 7e-06 5e-05
GO:0019222 regulation of metabolic process 9.43% (15/159) 1.98 7e-06 5.1e-05
GO:0003674 molecular_function 52.83% (84/159) 0.52 2.8e-05 0.000187
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 5.03% (8/159) 2.49 0.000101 0.000664
GO:0016746 acyltransferase activity 5.03% (8/159) 2.45 0.000123 0.000783
GO:0061630 ubiquitin protein ligase activity 1.89% (3/159) 4.93 0.000127 0.000788
GO:0061659 ubiquitin-like protein ligase activity 1.89% (3/159) 4.88 0.000144 0.000869
GO:0016798 hydrolase activity, acting on glycosyl bonds 5.03% (8/159) 2.4 0.000154 0.000903
GO:0003824 catalytic activity 30.19% (48/159) 0.7 0.000251 0.001437
GO:0036211 protein modification process 11.95% (19/159) 1.29 0.00031 0.001728
GO:0016567 protein ubiquitination 2.52% (4/159) 3.58 0.000366 0.001993
GO:0140096 catalytic activity, acting on a protein 13.84% (22/159) 1.14 0.000397 0.002107
GO:0032446 protein modification by small protein conjugation 2.52% (4/159) 3.51 0.000439 0.002227
GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity 1.26% (2/159) 5.93 0.000457 0.002266
GO:0043412 macromolecule modification 11.95% (19/159) 1.24 0.000437 0.002266
GO:0005975 carbohydrate metabolic process 5.66% (9/159) 1.99 0.000492 0.002386
GO:0008375 acetylglucosaminyltransferase activity 1.26% (2/159) 5.35 0.001066 0.005058
GO:0045927 positive regulation of growth 1.26% (2/159) 5.13 0.001462 0.006654
GO:0040008 regulation of growth 1.26% (2/159) 5.13 0.001462 0.006654
GO:0006487 protein N-linked glycosylation 1.26% (2/159) 5.03 0.001682 0.007504
GO:0070647 protein modification by small protein conjugation or removal 2.52% (4/159) 2.87 0.002284 0.009985
GO:0140103 catalytic activity, acting on a glycoprotein 1.26% (2/159) 4.77 0.002432 0.010429
GO:0048518 positive regulation of biological process 1.26% (2/159) 4.29 0.00468 0.019327
GO:0007165 signal transduction 3.77% (6/159) 1.97 0.004635 0.019501
GO:0043687 post-translational protein modification 2.52% (4/159) 2.53 0.005226 0.021189
GO:1902936 phosphatidylinositol bisphosphate binding 1.26% (2/159) 4.18 0.005446 0.021308
GO:0005546 phosphatidylinositol-4,5-bisphosphate binding 1.26% (2/159) 4.18 0.005446 0.021308
GO:1901981 phosphatidylinositol phosphate binding 1.26% (2/159) 4.13 0.00585 0.02211
GO:0071704 organic substance metabolic process 19.5% (31/159) 0.67 0.005789 0.022258
GO:0044238 primary metabolic process 18.87% (30/159) 0.68 0.006156 0.022878
GO:0006887 exocytosis 1.26% (2/159) 4.03 0.006696 0.024479
GO:0140352 export from cell 1.26% (2/159) 3.98 0.007139 0.024491
GO:0046903 secretion 1.26% (2/159) 3.98 0.007139 0.024491
GO:0032940 secretion by cell 1.26% (2/159) 3.98 0.007139 0.024491
GO:0000145 exocyst 1.26% (2/159) 3.98 0.007139 0.024491
GO:0099023 vesicle tethering complex 1.26% (2/159) 3.65 0.011136 0.037626
GO:0005509 calcium ion binding 2.52% (4/159) 2.12 0.013913 0.046308
GO:0009719 response to endogenous stimulus 1.89% (3/159) 2.55 0.014795 0.047817
GO:0009725 response to hormone 1.89% (3/159) 2.55 0.014795 0.047817
GO:0004672 protein kinase activity 8.18% (13/159) 0.96 0.017092 0.048866
GO:0006468 protein phosphorylation 8.18% (13/159) 0.98 0.015389 0.049025
GO:0008152 metabolic process 19.5% (31/159) 0.56 0.016763 0.049185
GO:0035091 phosphatidylinositol binding 1.26% (2/159) 3.35 0.016551 0.049212
GO:0050896 response to stimulus 3.77% (6/159) 1.56 0.017066 0.049424
GO:0006979 response to oxidative stress 1.89% (3/159) 2.5 0.016415 0.049467
GO:0006665 sphingolipid metabolic process 0.63% (1/159) 5.93 0.016246 0.049629
GO:0006672 ceramide metabolic process 0.63% (1/159) 5.93 0.016246 0.049629
GO:0016310 phosphorylation 8.18% (13/159) 0.97 0.01582 0.049689
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_58 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_149 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_1 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_2 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_21 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_27 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_33 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_36 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_62 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_71 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_102 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_129 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_145 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_167 0.018 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_183 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_184 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_189 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_208 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_209 0.026 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_211 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_212 0.016 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_218 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (159) (download table)

InterPro Domains

GO Terms

Family Terms