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  5. Lsat_1_v5_gn_7_34581.1

Lsat_1_v5_gn_7_34581.1 (EIF4A-2)


Aliases : EIF4A-2

Description : mRNA unwinding factor *(eIF4A))


Gene families : OG0001159 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001159_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_34581.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_179


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003684 damaged DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003735 structural constituent of ribosome IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006289 nucleotide-excision repair IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006412 translation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006457 protein folding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010498 proteasomal protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030163 protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0035145 exon-exon junction complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043603 amide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 65 226
IPR001650 Helicase_C 266 374
No external refs found!