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Aliases : LARP6a, AtLARP6a
Description : regulatory protein *(LARP6) of mRNA quality control
Gene families : OG0031979 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_29840.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_139 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0001727 | lipid kinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004143 | ATP-dependent diacylglycerol kinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005244 | voltage-gated monoatomic ion channel activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005253 | monoatomic anion channel activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005254 | chloride channel activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005543 | phospholipid binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005681 | spliceosomal complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006397 | mRNA processing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006417 | regulation of translation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006448 | regulation of translational elongation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006449 | regulation of translational termination | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006488 | dolichol-linked oligosaccharide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006490 | oligosaccharide-lipid intermediate biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006820 | monoatomic anion transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006821 | chloride transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006887 | exocytosis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0007165 | signal transduction | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0007205 | protein kinase C-activating G protein-coupled receptor signaling pathway | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008134 | transcription factor binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008238 | exopeptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008289 | lipid binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008308 | voltage-gated monoatomic anion channel activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008509 | monoatomic anion transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009314 | response to radiation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009411 | response to UV | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009416 | response to light stimulus | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010628 | positive regulation of gene expression | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015108 | chloride transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016093 | polyprenol metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0017025 | TBP-class protein binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019348 | dolichol metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0022832 | voltage-gated channel activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032940 | secretion by cell | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034248 | regulation of amide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034250 | positive regulation of amide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0043022 | ribosome binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043243 | positive regulation of protein-containing complex disassembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043244 | regulation of protein-containing complex disassembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0045727 | positive regulation of translation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0045901 | positive regulation of translational elongation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0045905 | positive regulation of translational termination | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046903 | secretion | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0048522 | positive regulation of cellular process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051130 | positive regulation of cellular component organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051247 | positive regulation of protein metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0099023 | vesicle tethering complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0140352 | export from cell | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:1901981 | phosphatidylinositol phosphate binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:1902936 | phosphatidylinositol bisphosphate binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| No external refs found! |