Lsat_1_v5_gn_7_19041.1 (CLC1)

Aliases : CLC1

Description : light chain of clathrin triskelion

Gene families : OG0032477 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_19041.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_229

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030118	clathrin coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030125	clathrin vesicle coat	None	Extended
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEA	Interproscan
CC	GO:0030132	clathrin coat of coated pit	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004559	alpha-mannosidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005048	signal sequence binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005096	GTPase activator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005261	monoatomic cation channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005739	mitochondrion	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005787	signal peptidase complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006465	signal peptide processing	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006487	protein N-linked glycosylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006621	protein retention in ER lumen	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008047	enzyme activator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0008250	oligosaccharyltransferase complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010921	regulation of phosphatase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015078	proton transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015252	proton channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015923	mannosidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015931	nucleobase-containing compound transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0016020	membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0017119	Golgi transport complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031399	regulation of protein modification process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032507	maintenance of protein location in cell	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032780	negative regulation of ATP-dependent activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0032977	membrane insertase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0033218	amide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0034998	oligosaccharyltransferase I complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0035303	regulation of dephosphorylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0035304	regulation of protein dephosphorylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0042030	ATPase inhibitor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0042277	peptide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043461	proton-transporting ATP synthase complex assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043462	regulation of ATP-dependent activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044092	negative regulation of molecular function	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045185	maintenance of protein location	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046923	ER retention sequence binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0050790	regulation of catalytic activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051235	maintenance of location	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051336	regulation of hydrolase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0051536	iron-sulfur cluster binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0051540	metal cluster binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051651	maintenance of location in cell	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0060590	ATPase regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0065009	regulation of molecular function	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0070071	proton-transporting two-sector ATPase complex assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072595	maintenance of protein localization in organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0098588	bounding membrane of organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0110165	cellular anatomical entity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140104	molecular carrier activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140597	protein carrier chaperone	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140677	molecular function activator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901264	carbohydrate derivative transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1902494	catalytic complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1905368	peptidase complex	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000996	Clathrin_L-chain	65	229

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Lsat_1_v5_gn_7_19041.1 (CLC1)

Expression Profile

Co-expression Networks

Functional Annotation