Lsat_1_v5_gn_7_16100.1 (ATPC1)

Aliases : ATPC1

Description : subunit gamma of peripheral CF1 subcomplex of ATP synthase complex

Gene families : OG0031747 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_16100.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_204

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005261	monoatomic cation channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006164	purine nucleotide biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006754	ATP biosynthetic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009142	nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	Find specific profiles GO:0009145	purine nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009152	purine ribonucleotide biosynthetic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	None	Extended
MF	GO:0015252	proton channel activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015986	proton motive force-driven ATP synthesis	IEA	Interproscan
MF	GO:0016874	ligase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	IEA	Interproscan
BP	GO:0046034	ATP metabolic process	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEA	Interproscan
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072522	purine-containing compound biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004356	glutamine synthetase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004618	phosphoglycerate kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005509	calcium ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006082	organic acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006090	pyruvate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006096	glycolytic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006536	glutamate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006537	glutamate biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006541	glutamine metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006542	glutamine biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008652	amino acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008942	nitrite reductase [NAD(P)H] activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0009507	chloroplast	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0009521	photosystem	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0009522	photosystem I	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0009523	photosystem II	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0009536	plastid	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0009538	photosystem I reaction center	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010109	regulation of photosynthesis	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010207	photosystem II assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0010242	oxygen evolving activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015930	glutamate synthase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015979	photosynthesis	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016052	carbohydrate catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016211	ammonia ligase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016832	aldehyde-lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016854	racemase and epimerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016887	ATP hydrolysis activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019752	carboxylic acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0019898	extrinsic component of membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0022607	cellular component assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030145	manganese ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0032977	membrane insertase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042549	photosystem II stabilization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043436	oxoacid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043650	dicarboxylic acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043933	protein-containing complex organization	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046857	oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0051287	NAD binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0065003	protein-containing complex assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0098809	nitrite reductase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140104	molecular carrier activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140597	protein carrier chaperone	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1902494	catalytic complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1990204	oxidoreductase complex	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000131	ATP_synth_F1_gsu	53	373

External Links

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Lsat_1_v5_gn_7_16100.1 (ATPC1)

Expression Profile

Co-expression Networks

Functional Annotation