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  5. Lsat_1_v5_gn_7_112421.1

Lsat_1_v5_gn_7_112421.1 (LOS1)


Aliases : LOS1

Description : mRNA-translocation factor *(eEF2))


Gene families : OG0001537 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001537_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_112421.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_137


Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000469 obsolete cleavage involved in rRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0000786 nucleosome IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0001522 pseudouridine synthesis IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003735 structural constituent of ribosome IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003746 translation elongation factor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005741 mitochondrial outer membrane IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006412 translation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006414 translational elongation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006417 regulation of translation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006448 regulation of translational elongation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006449 regulation of translational termination IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006605 protein targeting IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006612 protein targeting to membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006613 cotranslational protein targeting to membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008097 5S rRNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0008250 oligosaccharyltransferase complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008312 7S RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009891 positive regulation of biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009893 positive regulation of metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010608 post-transcriptional regulation of gene expression IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010628 positive regulation of gene expression IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030289 protein phosphatase 4 complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030515 snoRNA binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031325 positive regulation of cellular metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031968 organelle outer membrane IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034248 regulation of amide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034250 positive regulation of amide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043021 ribonucleoprotein complex binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043022 ribosome binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043244 regulation of protein-containing complex disassembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043603 amide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045047 protein targeting to ER IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045727 positive regulation of translation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045901 positive regulation of translational elongation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045905 positive regulation of translational termination IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0048500 signal recognition particle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048518 positive regulation of biological process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048522 positive regulation of cellular process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051128 regulation of cellular component organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051130 positive regulation of cellular component organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051247 positive regulation of protein metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070972 protein localization to endoplasmic reticulum IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR041095 EFG_II 487 549
IPR005517 Transl_elong_EFG/EF2_IV 611 722
IPR004161 EFTu-like_2 394 467
IPR000795 T_Tr_GTP-bd_dom 17 342
IPR000640 EFG_V-like 724 811
No external refs found!