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  5. Lsat_1_v5_gn_6_96860.1

Lsat_1_v5_gn_6_96860.1


Description : not classified


Gene families : OG0038507 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_96860.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_31


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004176 ATP-dependent peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005506 iron ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006720 isoprenoid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006778 porphyrin-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006788 heme oxidation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008168 methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008299 isoprenoid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008610 lipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0009975 cyclase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0009976 tocopherol cyclase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042168 heme metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042440 pigment metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002683 PsbP_C 113 256
No external refs found!