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  5. Lsat_1_v5_gn_6_87460.1

Lsat_1_v5_gn_6_87460.1 (TMP-A, ATHH2, PIP1;2, PIP1B)


Aliases : TMP-A, ATHH2, PIP1;2, PIP1B

Description : plasma membrane intrinsic protein *(PIP)


Gene families : OG0000536 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_87460.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Bra004950 TMP-A, ATHH2,... plasma membrane intrinsic protein *(PIP) 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015291 secondary active transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015297 antiporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0016459 myosin complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030599 pectinesterase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042545 cell wall modification IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0052689 carboxylic ester hydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000425 MIP 44 274
No external refs found!