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  5. Lsat_1_v5_gn_6_83201.1

Lsat_1_v5_gn_6_83201.1


Description : not classified


Gene families : OG0000051 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_83201.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_1_74240.1 FMT, NOXY38, FRIENDLY not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_3_99661.1 PIRL3 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_6_4420.1 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005783 endoplasmic reticulum IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006457 protein folding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009250 glucan biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016759 cellulose synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030243 cellulose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030244 cellulose biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0035251 UDP-glucosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044042 glucan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051082 unfolded protein binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051273 beta-glucan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051274 beta-glucan biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!