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  5. Lsat_1_v5_gn_6_8160.1

Lsat_1_v5_gn_6_8160.1 (SBT1.8)


Aliases : SBT1.8

Description : not classified


Gene families : OG0000989 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000989_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_8160.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_44


Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008236 serine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005507 copper ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006308 DNA catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015020 glucuronosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016849 phosphorus-oxygen lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019439 aromatic compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030599 pectinesterase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0033897 ribonuclease T2 activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042545 cell wall modification IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050660 flavin adenine dinucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0052689 carboxylic ester hydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR041469 Subtilisin-like_FN3 635 732
IPR010259 S8pro/Inhibitor_I9 29 110
IPR003137 PA_domain 355 441
IPR000209 Peptidase_S8/S53_dom 133 561
No external refs found!