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  5. Lsat_1_v5_gn_6_69600.1

Lsat_1_v5_gn_6_69600.1 (ABCG39, ATPDR11, PDR11)


Aliases : ABCG39, ATPDR11, PDR11

Description : subfamily ABCG transporter


Gene families : OG0017539 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_69600.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_224


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005787 signal peptidase complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006465 signal peptide processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008610 lipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016485 protein processing IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016746 acyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044255 cellular lipid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045017 glycerolipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051604 protein maturation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 135 317
IPR013581 PDR_assoc 696 754
IPR029481 ABC_trans_N 19 110
IPR013525 ABC2_TM 1137 1349
IPR013525 ABC2_TM 471 683
IPR043926 ABCG_dom 350 402
IPR003439 ABC_transporter-like_ATP-bd 839 991
No external refs found!