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  5. Lsat_1_v5_gn_6_54241.1

Lsat_1_v5_gn_6_54241.1 (SCL30A, At-SCL30A)


Aliases : SCL30A, At-SCL30A

Description : RNA splicing factor *(SCL28/30/33)


Gene families : OG0039024 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_54241.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_132


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005777 peroxisome IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006099 tricarboxylic acid cycle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006302 double-strand break repair IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006310 DNA recombination IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006635 fatty acid beta-oxidation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009062 fatty acid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009966 regulation of signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010646 regulation of cell communication IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016042 lipid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016054 organic acid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019395 fatty acid oxidation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0023051 regulation of signaling IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030258 lipid modification IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034440 lipid oxidation IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0042579 microbody IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044242 cellular lipid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044282 small molecule catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046395 carboxylic acid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072329 monocarboxylic acid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000504 RRM_dom 41 110
No external refs found!