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  5. Lsat_1_v5_gn_6_3180.1

Lsat_1_v5_gn_6_3180.1 (ATHAM3, LOM3, SCL6-IV, HAM3)


Aliases : ATHAM3, LOM3, SCL6-IV, HAM3

Description : GRAS-type transcription factor


Gene families : OG0016338 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_3180.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_218


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016778 diphosphotransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019208 phosphatase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019888 protein phosphatase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030151 molybdenum ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005202 TF_GRAS 321 678
No external refs found!