Lsat_1_v5_gn_5_67100.1 (CID12, ATRBP37, RBP37)


Aliases : CID12, ATRBP37, RBP37

Description : not classified


Gene families : OG0001707 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001707_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_67100.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_106


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003746 translation elongation factor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004357 glutamate-cysteine ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005783 endoplasmic reticulum IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005875 microtubule associated complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006414 translational elongation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006479 protein methylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006575 cellular modified amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006873 intracellular monoatomic ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006874 intracellular calcium ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007051 spindle organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008213 protein alkylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016571 histone methylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016881 acid-amino acid ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018022 peptidyl-lysine methylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019207 kinase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019725 cellular homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019887 protein kinase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019915 lipid storage IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030003 intracellular monoatomic cation homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030014 CCR4-NOT complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030880 RNA polymerase complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031123 RNA 3'-end processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031124 mRNA 3'-end processing IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032469 endoplasmic reticulum calcium ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034968 histone lysine methylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042592 homeostatic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043015 gamma-tubulin binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043085 positive regulation of catalytic activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044093 positive regulation of molecular function IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048878 chemical homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050660 flavin adenine dinucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050801 monoatomic ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051225 spindle assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051235 maintenance of location IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055074 calcium ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055080 monoatomic cation homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055082 intracellular chemical homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0070652 HAUS complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070925 organelle assembly IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0071949 FAD binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0098771 inorganic ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0140694 non-membrane-bounded organelle assembly IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000504 RRM_dom 287 354
IPR000504 RRM_dom 190 252
IPR009818 Ataxin-2_C 97 112
No external refs found!