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  5. Bra006338

Bra006338 (CCT6-1)


Aliases : CCT6-1

Description : subunit zeta *(CCT6) of CCT chaperonin folding complex


Gene families : OG0001910 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001910_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra006338
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_4_153000.1 CCT6-2 subunit zeta *(CCT6) of CCT chaperonin folding complex 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.01703 CCT6-2 subunit zeta *(CCT6) of CCT chaperonin folding complex 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003735 structural constituent of ribosome IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004743 pyruvate kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006090 pyruvate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006091 generation of precursor metabolites and energy IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006096 glycolytic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006412 translation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008173 RNA methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Brassica rapa GO terms from Neighborhoods
BP GO:0018193 peptidyl-amino acid modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0018208 peptidyl-proline modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030955 potassium ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031420 alkali metal ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043603 amide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 356 447
IPR002423 Cpn60/GroEL/TCP-1 8 353
No external refs found!