Lsat_1_v5_gn_5_189660.1 (BAF60, SWP73B, CHC1)


Aliases : BAF60, SWP73B, CHC1

Description : not classified


Gene families : OG0009249 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_189660.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_9


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003697 single-stranded DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003937 IMP cyclohydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005488 binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006163 purine nucleotide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006164 purine nucleotide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006177 GMP biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006457 protein folding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006753 nucleoside phosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009117 nucleotide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009123 nucleoside monophosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009165 nucleotide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019238 cyclohydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019637 organophosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0044183 protein folding chaperone IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046037 GMP metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0071949 FAD binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072521 purine-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072522 purine-containing compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0090407 organophosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140662 ATP-dependent protein folding chaperone IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR023210 NADP_OxRdtase_dom 47 357
No external refs found!