1. Home
  2. Species
  3. Lactuca sativa
  4. Sequence
  5. Lsat_1_v5_gn_5_184101.1

Lsat_1_v5_gn_5_184101.1


Description : component *(eS24) of small ribosomal-subunit (SSU) proteome


Gene families : OG0000544 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000544_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_184101.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Bra009989 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.12 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra020605 CYSD2, ATCYSD2 component *(eS24) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra040115 No alias component *(eS24) of small ribosomal-subunit (SSU) proteome 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003937 IMP cyclohydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006547 histidine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008097 5S rRNA binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0015934 large ribosomal subunit IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019238 cyclohydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0044391 ribosomal subunit IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001976 Ribosomal_eS24 26 104
No external refs found!