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  5. Lsat_1_v5_gn_5_178960.1

Lsat_1_v5_gn_5_178960.1 (CIB2)


Aliases : CIB2

Description : regulatory protein (CIB) of blue light perception. bHLH-type transcription factor


Gene families : OG0008929 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_178960.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_167


Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006631 fatty acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006633 fatty acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008199 ferric iron binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009605 response to external stimulus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009606 tropism IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010215 cellulose microfibril organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010274 hydrotropism IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030198 extracellular matrix organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043062 extracellular structure organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901681 sulfur compound binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011598 bHLH_dom 319 366
No external refs found!