Lsat_1_v5_gn_5_165201.1 (ABCB1, PGP1, ATPGP1)


Aliases : ABCB1, PGP1, ATPGP1

Description : not classified


Gene families : OG0001724 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001724_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_165201.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_17


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009767 photosynthetic electron transport chain IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016168 chlorophyll binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019684 photosynthesis, light reaction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022900 electron transport chain IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030127 COPII vesicle coat IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 282 319
IPR011527 ABC1_TM_dom 1 111
IPR011527 ABC1_TM_dom 128 213
No external refs found!