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  5. Lsat_1_v5_gn_5_163881.1

Lsat_1_v5_gn_5_163881.1 (PGF8)


Aliases : PGF8

Description : EC_3.2 glycosylase


Gene families : OG0046500 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_163881.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_21


Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004743 pyruvate kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006090 pyruvate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006091 generation of precursor metabolites and energy IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006096 glycolytic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006536 glutamate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006537 glutamate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008652 amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0009055 electron transfer activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009064 glutamine family amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009605 response to external stimulus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009606 tropism IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010274 hydrotropism IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015930 glutamate synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0020037 heme binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030955 potassium ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031420 alkali metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032787 monocarboxylic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043648 dicarboxylic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901605 alpha-amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901607 alpha-amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR024535 Pectate_lyase_SF_prot 53 107
IPR000743 Glyco_hydro_28 111 402
No external refs found!