Lsat_1_v5_gn_5_15861.1 (DCA1, CLPC,...)


Aliases : DCA1, CLPC, ATHSP93-V, CLPC1, HSP93-V

Description : chaperone component *(ClpC) of chloroplast Clp-type protease complex


Gene families : OG0005346 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005346_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_15861.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_187


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006351 DNA-templated transcription IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006576 biogenic amine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009309 amine biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030410 nicotianamine synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030417 nicotianamine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030418 nicotianamine biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032392 DNA geometric change IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032508 DNA duplex unwinding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0034062 5'-3' RNA polymerase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042401 biogenic amine biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072350 tricarboxylic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097747 RNA polymerase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 607 781
IPR019489 Clp_ATPase_C 788 868
IPR004176 Clp_R_dom 185 236
IPR004176 Clp_R_dom 109 161
IPR003959 ATPase_AAA_core 300 375
IPR041546 ClpA/ClpB_AAA_lid 410 509
No external refs found!