Lsat_1_v5_gn_5_138960.1


Description : pectin methylesterase. EC_3.1 hydrolase acting on ester bond


Gene families : OG0044937 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_138960.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_15


Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008146 sulfotransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016854 racemase and epimerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 12 100
IPR000070 Pectinesterase_cat 151 445
No external refs found!