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  5. Lsat_1_v5_gn_4_71080.1

Lsat_1_v5_gn_4_71080.1


Description : not classified


Gene families : OG0003525 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003525_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_71080.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_187

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_4_71020.1 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
BP GO:0048364 root development IEA Interproscan
BP GO:0048367 shoot system development IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000271 polysaccharide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004743 pyruvate kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005375 copper ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006825 copper ion transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0009055 electron transfer activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009250 glucan biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016051 carbohydrate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030955 potassium ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031420 alkali metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0035251 UDP-glucosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0035434 copper ion transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044042 glucan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046527 glucosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051273 beta-glucan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051274 beta-glucan biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004320 BPS1_pln 57 297
No external refs found!