Lsat_1_v5_gn_4_20360.1 (ATTADA, TADA, TADA1)

Aliases : ATTADA, TADA, TADA1

Description : chloroplast-tRNA adenosine deaminase

Gene families : OG0017131 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_20360.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_202

Type	GO Term	Name	Evidence	Source
BP	GO:0002097	tRNA wobble base modification	None	Extended
BP	GO:0002100	tRNA wobble adenosine to inosine editing	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004000	adenosine deaminase activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006382	adenosine to inosine editing	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006400	tRNA modification	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008251	tRNA-specific adenosine deaminase activity	IEA	Interproscan
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016553	base conversion or substitution editing	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	None	Extended
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	None	Extended
MF	GO:0019239	deaminase activity	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004146	dihydrofolate reductase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004470	malic enzyme activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004471	malate dehydrogenase (decarboxylating) (NAD+) activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004749	ribose phosphate diphosphokinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006479	protein methylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006486	protein glycosylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006547	histidine metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008213	protein alkylation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008270	zinc ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008373	sialyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008484	sulfuric ester hydrolase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009396	folic acid-containing compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016571	histone methylation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016615	malate dehydrogenase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016778	diphosphotransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016887	ATP hydrolysis activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0018022	peptidyl-lysine methylation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0018024	obsolete histone lysine N-methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034968	histone lysine methylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043413	macromolecule glycosylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046653	tetrahydrofolate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046654	tetrahydrofolate biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0070085	glycosylation	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR028883	tRNA_aden_deaminase	767	865

External Links

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Lsat_1_v5_gn_4_20360.1 (ATTADA, TADA, TADA1)

Expression Profile

Co-expression Networks

Functional Annotation