Aliases : SAC56
Description : component *(uL4) of large ribosomal-subunit (LSU) proteome
Gene families : OG0000744 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000744_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_141681.1 | |
Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_28 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bra001302 | SAC56 | component *(uL4) of large ribosomal-subunit (LSU) proteome | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Bra005749 | RPL4 | component *(uL4) of large ribosomal-subunit (LSU) proteome | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Bra009560 | RPL4 | component *(uL4) of large ribosomal-subunit (LSU) proteome | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Bra029780 | SAC56 | component *(uL4) of large ribosomal-subunit (LSU) proteome | 0.16 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Bra034075 | SAC56 | component *(uL4) of large ribosomal-subunit (LSU) proteome | 0.12 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.01766 | SAC56 | component *(uL4) of large ribosomal-subunit (LSU) proteome | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr6.00569 | SAC56 | component *(uL4) of large ribosomal-subunit (LSU) proteome | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0003937 | IMP cyclohydrolase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0004643 | phosphoribosylaminoimidazolecarboxamide formyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0008097 | 5S rRNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
CC | GO:0015934 | large ribosomal subunit | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0019238 | cyclohydrolase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0019843 | rRNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
CC | GO:0044391 | ribosomal subunit | IEP | Lactuca Sativa GO terms from Neighborhoods |
No external refs found! |