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  5. Lsat_1_v5_gn_4_131841.1

Lsat_1_v5_gn_4_131841.1


Description : component *(TFC4/Tau131) of TFIIIc transcription factor complex


Gene families : OG0009211 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_131841.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_132


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003972 RNA ligase (ATP) activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004402 histone acetyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004484 mRNA guanylyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004721 phosphoprotein phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005956 protein kinase CK2 complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006354 DNA-templated transcription elongation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006368 transcription elongation by RNA polymerase II IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006370 7-methylguanosine mRNA capping IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006473 protein acetylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006475 internal protein amino acid acetylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006479 protein methylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006811 monoatomic ion transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006906 vesicle fusion IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007030 Golgi organization IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0008023 transcription elongation factor complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008192 RNA guanylyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008213 protein alkylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008452 RNA ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009452 7-methylguanosine RNA capping IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010921 regulation of phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015299 obsolete solute:proton antiporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016050 vesicle organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016311 dephosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016570 histone modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016571 histone methylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016573 histone acetylation IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0016593 Cdc73/Paf1 complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018022 peptidyl-lysine methylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018193 peptidyl-amino acid modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018205 peptidyl-lysine modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018393 internal peptidyl-lysine acetylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018394 peptidyl-lysine acetylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019207 kinase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019781 NEDD8 activating enzyme activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019887 protein kinase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019902 phosphatase binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019903 protein phosphatase binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032446 protein modification by small protein conjugation IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0034212 peptide N-acetyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034968 histone lysine methylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0035303 regulation of dephosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0035304 regulation of protein dephosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0036260 RNA capping IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042393 histone binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043226 organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043543 protein acylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045116 protein neddylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048284 organelle fusion IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051336 regulation of hydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0061024 membrane organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0061025 membrane fusion IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070403 NAD+ binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070568 guanylyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0090174 organelle membrane fusion IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140993 histone modifying activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1902554 serine/threonine protein kinase complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1902911 protein kinase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR019734 TPR_repeat 859 890
No external refs found!