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  5. Lsat_1_v5_gn_3_87140.1

Lsat_1_v5_gn_3_87140.1


Description : EC_3.2 glycosylase


Gene families : OG0034239 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_87140.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_160


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003887 DNA-directed DNA polymerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005488 binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005750 mitochondrial respiratory chain complex III IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006260 DNA replication IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006270 DNA replication initiation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006275 regulation of DNA replication IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009262 deoxyribonucleotide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010639 negative regulation of organelle organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032392 DNA geometric change IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032508 DNA duplex unwinding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032780 negative regulation of ATP-dependent activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033043 regulation of organelle organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033044 regulation of chromosome organization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0034061 DNA polymerase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0042555 MCM complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043086 negative regulation of catalytic activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043462 regulation of ATP-dependent activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044092 negative regulation of molecular function IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0045275 respiratory chain complex III IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051052 regulation of DNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051095 regulation of helicase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051097 negative regulation of helicase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051128 regulation of cellular component organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051129 negative regulation of cellular component organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0070069 cytochrome complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0070469 respirasome IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071103 DNA conformation change IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098803 respiratory chain complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1902495 transmembrane transporter complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1905462 regulation of DNA duplex unwinding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1905463 negative regulation of DNA duplex unwinding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1905774 regulation of DNA helicase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1905775 negative regulation of DNA helicase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1990351 transporter complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:2001251 negative regulation of chromosome organization IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012946 X8 303 374
No external refs found!