Coexpression cluster: Cluster_160 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003677 DNA binding 33.33% (17/51) 3.65 0.0 0.0
GO:0071103 DNA conformation change 13.73% (7/51) 7.03 0.0 0.0
GO:0032508 DNA duplex unwinding 11.76% (6/51) 7.77 0.0 0.0
GO:0032392 DNA geometric change 11.76% (6/51) 7.77 0.0 0.0
GO:0051276 chromosome organization 13.73% (7/51) 6.5 0.0 0.0
GO:0003676 nucleic acid binding 37.25% (19/51) 2.86 0.0 0.0
GO:0006996 organelle organization 13.73% (7/51) 5.83 0.0 0.0
GO:0006259 DNA metabolic process 11.76% (6/51) 4.93 0.0 1e-06
GO:0016043 cellular component organization 13.73% (7/51) 4.14 0.0 2e-06
GO:0071840 cellular component organization or biogenesis 13.73% (7/51) 4.08 0.0 3e-06
GO:0097159 organic cyclic compound binding 41.18% (21/51) 1.58 1e-06 1.9e-05
GO:1901363 heterocyclic compound binding 41.18% (21/51) 1.58 1e-06 1.9e-05
GO:0006270 DNA replication initiation 3.92% (2/51) 9.58 2e-06 2.1e-05
GO:0006139 nucleobase-containing compound metabolic process 15.69% (8/51) 3.0 6e-06 7.3e-05
GO:0090304 nucleic acid metabolic process 13.73% (7/51) 3.16 1.3e-05 0.00012
GO:0046483 heterocycle metabolic process 15.69% (8/51) 2.87 1.2e-05 0.000123
GO:0006725 cellular aromatic compound metabolic process 15.69% (8/51) 2.88 1.2e-05 0.000126
GO:1901360 organic cyclic compound metabolic process 15.69% (8/51) 2.82 1.6e-05 0.000143
GO:0006260 DNA replication 5.88% (3/51) 5.7 2.7e-05 0.000216
GO:0005488 binding 49.02% (25/51) 1.13 2.7e-05 0.000225
GO:0034641 cellular nitrogen compound metabolic process 15.69% (8/51) 2.35 0.000152 0.001161
GO:0042555 MCM complex 1.96% (1/51) 9.58 0.001311 0.007232
GO:1905463 negative regulation of DNA duplex unwinding 1.96% (1/51) 9.58 0.001311 0.007232
GO:0051095 regulation of helicase activity 1.96% (1/51) 9.58 0.001311 0.007232
GO:1905774 regulation of DNA helicase activity 1.96% (1/51) 9.58 0.001311 0.007232
GO:1905462 regulation of DNA duplex unwinding 1.96% (1/51) 9.58 0.001311 0.007232
GO:1905775 negative regulation of DNA helicase activity 1.96% (1/51) 9.58 0.001311 0.007232
GO:0051097 negative regulation of helicase activity 1.96% (1/51) 9.58 0.001311 0.007232
GO:0003896 DNA primase activity 1.96% (1/51) 9.58 0.001311 0.007232
GO:0140640 catalytic activity, acting on a nucleic acid 7.84% (4/51) 2.99 0.001619 0.008633
GO:0043462 regulation of ATP-dependent activity 1.96% (1/51) 8.58 0.00262 0.011643
GO:2001251 negative regulation of chromosome organization 1.96% (1/51) 8.58 0.00262 0.011643
GO:0032780 negative regulation of ATP-dependent activity 1.96% (1/51) 8.58 0.00262 0.011643
GO:0008608 attachment of spindle microtubules to kinetochore 1.96% (1/51) 8.58 0.00262 0.011643
GO:0043086 negative regulation of catalytic activity 1.96% (1/51) 8.58 0.00262 0.011643
GO:0051315 attachment of mitotic spindle microtubules to kinetochore 1.96% (1/51) 8.58 0.00262 0.011643
GO:0009987 cellular process 29.41% (15/51) 1.08 0.00312 0.013491
GO:0044092 negative regulation of molecular function 1.96% (1/51) 7.99 0.003927 0.015708
GO:0006269 DNA replication, synthesis of RNA primer 1.96% (1/51) 7.99 0.003927 0.015708
GO:0006275 regulation of DNA replication 1.96% (1/51) 7.99 0.003927 0.015708
GO:0005524 ATP binding 15.69% (8/51) 1.61 0.00417 0.016273
GO:0033044 regulation of chromosome organization 1.96% (1/51) 7.58 0.005233 0.019028
GO:0009263 deoxyribonucleotide biosynthetic process 1.96% (1/51) 7.58 0.005233 0.019028
GO:0009262 deoxyribonucleotide metabolic process 1.96% (1/51) 7.58 0.005233 0.019028
GO:1903047 mitotic cell cycle process 1.96% (1/51) 7.25 0.006537 0.021789
GO:0070469 respirasome 1.96% (1/51) 7.25 0.006537 0.021789
GO:0031262 Ndc80 complex 1.96% (1/51) 7.25 0.006537 0.021789
GO:0180019 Knl1/Spc105 complex 1.96% (1/51) 7.25 0.006537 0.021789
GO:0051052 regulation of DNA metabolic process 1.96% (1/51) 6.99 0.007839 0.025597
GO:0140097 catalytic activity, acting on DNA 3.92% (2/51) 3.89 0.008131 0.02602
GO:0035639 purine ribonucleoside triphosphate binding 15.69% (8/51) 1.44 0.008632 0.027081
GO:0010639 negative regulation of organelle organization 1.96% (1/51) 6.77 0.00914 0.027592
GO:0051129 negative regulation of cellular component organization 1.96% (1/51) 6.77 0.00914 0.027592
GO:0032559 adenyl ribonucleotide binding 15.69% (8/51) 1.37 0.011217 0.033237
GO:0000166 nucleotide binding 17.65% (9/51) 1.25 0.012129 0.034653
GO:1901265 nucleoside phosphate binding 17.65% (9/51) 1.25 0.012129 0.034653
GO:0005750 mitochondrial respiratory chain complex III 1.96% (1/51) 6.25 0.013032 0.034751
GO:0033043 regulation of organelle organization 1.96% (1/51) 6.25 0.013032 0.034751
GO:0045275 respiratory chain complex III 1.96% (1/51) 6.25 0.013032 0.034751
GO:0003674 molecular_function 52.94% (27/51) 0.52 0.013678 0.035877
GO:0016779 nucleotidyltransferase activity 3.92% (2/51) 3.54 0.012877 0.036146
GO:0036094 small molecule binding 17.65% (9/51) 1.2 0.014902 0.038458
GO:0030554 adenyl nucleotide binding 15.69% (8/51) 1.29 0.015503 0.039374
GO:0070069 cytochrome complex 1.96% (1/51) 5.67 0.019485 0.047236
GO:1990351 transporter complex 1.96% (1/51) 5.67 0.019485 0.047236
GO:1902495 transmembrane transporter complex 1.96% (1/51) 5.67 0.019485 0.047236
GO:0032555 purine ribonucleotide binding 15.69% (8/51) 1.22 0.020052 0.047884
GO:0003887 DNA-directed DNA polymerase activity 1.96% (1/51) 5.58 0.020771 0.048164
GO:0097367 carbohydrate derivative binding 15.69% (8/51) 1.2 0.021186 0.048424
GO:0032553 ribonucleotide binding 15.69% (8/51) 1.21 0.02076 0.048848
GO:0051128 regulation of cellular component organization 1.96% (1/51) 5.49 0.022055 0.0497
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_1 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_10 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_12 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_17 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_18 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_32 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_34 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_39 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_46 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_50 0.022 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_53 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_56 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_61 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_63 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_66 0.019 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_68 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_83 0.025 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_89 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_135 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_148 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_149 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_155 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_164 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_167 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_185 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_199 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_213 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_231 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_273 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_50 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_77 0.019 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_141 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_163 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_127 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_138 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_148 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (51) (download table)

InterPro Domains

GO Terms

Family Terms