ID | Label | % in cluster | Enrichment log2 | p-value | Corrected p-value |
---|---|---|---|---|---|
GO:0003677 | DNA binding | 33.33% (17/51) | 3.65 | 0.0 | 0.0 |
GO:0071103 | DNA conformation change | 13.73% (7/51) | 7.03 | 0.0 | 0.0 |
GO:0032508 | DNA duplex unwinding | 11.76% (6/51) | 7.77 | 0.0 | 0.0 |
GO:0032392 | DNA geometric change | 11.76% (6/51) | 7.77 | 0.0 | 0.0 |
GO:0051276 | chromosome organization | 13.73% (7/51) | 6.5 | 0.0 | 0.0 |
GO:0003676 | nucleic acid binding | 37.25% (19/51) | 2.86 | 0.0 | 0.0 |
GO:0006996 | organelle organization | 13.73% (7/51) | 5.83 | 0.0 | 0.0 |
GO:0006259 | DNA metabolic process | 11.76% (6/51) | 4.93 | 0.0 | 1e-06 |
GO:0016043 | cellular component organization | 13.73% (7/51) | 4.14 | 0.0 | 2e-06 |
GO:0071840 | cellular component organization or biogenesis | 13.73% (7/51) | 4.08 | 0.0 | 3e-06 |
GO:0097159 | organic cyclic compound binding | 41.18% (21/51) | 1.58 | 1e-06 | 1.9e-05 |
GO:1901363 | heterocyclic compound binding | 41.18% (21/51) | 1.58 | 1e-06 | 1.9e-05 |
GO:0006270 | DNA replication initiation | 3.92% (2/51) | 9.58 | 2e-06 | 2.1e-05 |
GO:0006139 | nucleobase-containing compound metabolic process | 15.69% (8/51) | 3.0 | 6e-06 | 7.3e-05 |
GO:0090304 | nucleic acid metabolic process | 13.73% (7/51) | 3.16 | 1.3e-05 | 0.00012 |
GO:0046483 | heterocycle metabolic process | 15.69% (8/51) | 2.87 | 1.2e-05 | 0.000123 |
GO:0006725 | cellular aromatic compound metabolic process | 15.69% (8/51) | 2.88 | 1.2e-05 | 0.000126 |
GO:1901360 | organic cyclic compound metabolic process | 15.69% (8/51) | 2.82 | 1.6e-05 | 0.000143 |
GO:0006260 | DNA replication | 5.88% (3/51) | 5.7 | 2.7e-05 | 0.000216 |
GO:0005488 | binding | 49.02% (25/51) | 1.13 | 2.7e-05 | 0.000225 |
GO:0034641 | cellular nitrogen compound metabolic process | 15.69% (8/51) | 2.35 | 0.000152 | 0.001161 |
GO:0042555 | MCM complex | 1.96% (1/51) | 9.58 | 0.001311 | 0.007232 |
GO:1905463 | negative regulation of DNA duplex unwinding | 1.96% (1/51) | 9.58 | 0.001311 | 0.007232 |
GO:0051095 | regulation of helicase activity | 1.96% (1/51) | 9.58 | 0.001311 | 0.007232 |
GO:1905774 | regulation of DNA helicase activity | 1.96% (1/51) | 9.58 | 0.001311 | 0.007232 |
GO:1905462 | regulation of DNA duplex unwinding | 1.96% (1/51) | 9.58 | 0.001311 | 0.007232 |
GO:1905775 | negative regulation of DNA helicase activity | 1.96% (1/51) | 9.58 | 0.001311 | 0.007232 |
GO:0051097 | negative regulation of helicase activity | 1.96% (1/51) | 9.58 | 0.001311 | 0.007232 |
GO:0003896 | DNA primase activity | 1.96% (1/51) | 9.58 | 0.001311 | 0.007232 |
GO:0140640 | catalytic activity, acting on a nucleic acid | 7.84% (4/51) | 2.99 | 0.001619 | 0.008633 |
GO:0043462 | regulation of ATP-dependent activity | 1.96% (1/51) | 8.58 | 0.00262 | 0.011643 |
GO:2001251 | negative regulation of chromosome organization | 1.96% (1/51) | 8.58 | 0.00262 | 0.011643 |
GO:0032780 | negative regulation of ATP-dependent activity | 1.96% (1/51) | 8.58 | 0.00262 | 0.011643 |
GO:0008608 | attachment of spindle microtubules to kinetochore | 1.96% (1/51) | 8.58 | 0.00262 | 0.011643 |
GO:0043086 | negative regulation of catalytic activity | 1.96% (1/51) | 8.58 | 0.00262 | 0.011643 |
GO:0051315 | attachment of mitotic spindle microtubules to kinetochore | 1.96% (1/51) | 8.58 | 0.00262 | 0.011643 |
GO:0009987 | cellular process | 29.41% (15/51) | 1.08 | 0.00312 | 0.013491 |
GO:0044092 | negative regulation of molecular function | 1.96% (1/51) | 7.99 | 0.003927 | 0.015708 |
GO:0006269 | DNA replication, synthesis of RNA primer | 1.96% (1/51) | 7.99 | 0.003927 | 0.015708 |
GO:0006275 | regulation of DNA replication | 1.96% (1/51) | 7.99 | 0.003927 | 0.015708 |
GO:0005524 | ATP binding | 15.69% (8/51) | 1.61 | 0.00417 | 0.016273 |
GO:0033044 | regulation of chromosome organization | 1.96% (1/51) | 7.58 | 0.005233 | 0.019028 |
GO:0009263 | deoxyribonucleotide biosynthetic process | 1.96% (1/51) | 7.58 | 0.005233 | 0.019028 |
GO:0009262 | deoxyribonucleotide metabolic process | 1.96% (1/51) | 7.58 | 0.005233 | 0.019028 |
GO:1903047 | mitotic cell cycle process | 1.96% (1/51) | 7.25 | 0.006537 | 0.021789 |
GO:0070469 | respirasome | 1.96% (1/51) | 7.25 | 0.006537 | 0.021789 |
GO:0031262 | Ndc80 complex | 1.96% (1/51) | 7.25 | 0.006537 | 0.021789 |
GO:0180019 | Knl1/Spc105 complex | 1.96% (1/51) | 7.25 | 0.006537 | 0.021789 |
GO:0051052 | regulation of DNA metabolic process | 1.96% (1/51) | 6.99 | 0.007839 | 0.025597 |
GO:0140097 | catalytic activity, acting on DNA | 3.92% (2/51) | 3.89 | 0.008131 | 0.02602 |
GO:0035639 | purine ribonucleoside triphosphate binding | 15.69% (8/51) | 1.44 | 0.008632 | 0.027081 |
GO:0010639 | negative regulation of organelle organization | 1.96% (1/51) | 6.77 | 0.00914 | 0.027592 |
GO:0051129 | negative regulation of cellular component organization | 1.96% (1/51) | 6.77 | 0.00914 | 0.027592 |
GO:0032559 | adenyl ribonucleotide binding | 15.69% (8/51) | 1.37 | 0.011217 | 0.033237 |
GO:0000166 | nucleotide binding | 17.65% (9/51) | 1.25 | 0.012129 | 0.034653 |
GO:1901265 | nucleoside phosphate binding | 17.65% (9/51) | 1.25 | 0.012129 | 0.034653 |
GO:0005750 | mitochondrial respiratory chain complex III | 1.96% (1/51) | 6.25 | 0.013032 | 0.034751 |
GO:0033043 | regulation of organelle organization | 1.96% (1/51) | 6.25 | 0.013032 | 0.034751 |
GO:0045275 | respiratory chain complex III | 1.96% (1/51) | 6.25 | 0.013032 | 0.034751 |
GO:0003674 | molecular_function | 52.94% (27/51) | 0.52 | 0.013678 | 0.035877 |
GO:0016779 | nucleotidyltransferase activity | 3.92% (2/51) | 3.54 | 0.012877 | 0.036146 |
GO:0036094 | small molecule binding | 17.65% (9/51) | 1.2 | 0.014902 | 0.038458 |
GO:0030554 | adenyl nucleotide binding | 15.69% (8/51) | 1.29 | 0.015503 | 0.039374 |
GO:0070069 | cytochrome complex | 1.96% (1/51) | 5.67 | 0.019485 | 0.047236 |
GO:1990351 | transporter complex | 1.96% (1/51) | 5.67 | 0.019485 | 0.047236 |
GO:1902495 | transmembrane transporter complex | 1.96% (1/51) | 5.67 | 0.019485 | 0.047236 |
GO:0032555 | purine ribonucleotide binding | 15.69% (8/51) | 1.22 | 0.020052 | 0.047884 |
GO:0003887 | DNA-directed DNA polymerase activity | 1.96% (1/51) | 5.58 | 0.020771 | 0.048164 |
GO:0097367 | carbohydrate derivative binding | 15.69% (8/51) | 1.2 | 0.021186 | 0.048424 |
GO:0032553 | ribonucleotide binding | 15.69% (8/51) | 1.21 | 0.02076 | 0.048848 |
GO:0051128 | regulation of cellular component organization | 1.96% (1/51) | 5.49 | 0.022055 | 0.0497 |
Clade | % in cluster | Enrichment log2 | p-value | Corrected p-value | Gene Family Method |
---|---|---|---|---|---|
No enriched Clades found |
Species | Clustering Method | Target | Jaccard index | Gene Family Method (for comparison) | Actions |
---|---|---|---|---|---|
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_1 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_10 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_12 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_17 | 0.011 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_18 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_32 | 0.006 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_34 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_39 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_46 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_50 | 0.022 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_53 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_56 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_61 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_63 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_66 | 0.019 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_68 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_83 | 0.025 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_89 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_135 | 0.014 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_148 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_149 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_155 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_164 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_167 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_185 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_199 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_213 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_231 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_273 | 0.011 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_50 | 0.006 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_77 | 0.019 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_141 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_163 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_127 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_138 | 0.011 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_148 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |