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  5. Lsat_1_v5_gn_3_76401.1

Lsat_1_v5_gn_3_76401.1 (VPS39, EMB2754)


Aliases : VPS39, EMB2754

Description : HOPS-specific component *(VPS39) of HOPS/CORVET membrane tethering complexes


Gene families : OG0008794 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_76401.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_234


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006486 protein glycosylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006813 potassium ion transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008417 fucosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015079 potassium ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0035091 phosphatidylinositol binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043413 macromolecule glycosylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070085 glycosylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071805 potassium ion transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901702 salt transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001180 CNH_dom 77 288
IPR019453 VPS39/TGF_beta_rcpt-assoc_2 873 981
IPR019452 VPS39/TGF_beta_rcpt-assoc_1 509 612
No external refs found!