Lsat_1_v5_gn_3_63100.1 (TMO6, DOF5.3)

Aliases : TMO6, DOF5.3

Description : transcription factor *(DOF)

Gene families : OG0033292 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_63100.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_241

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003333	amino acid transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006629	lipid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006631	fatty acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006633	fatty acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006865	amino acid transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008610	lipid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015711	organic anion transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015849	organic acid transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016053	organic acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016409	palmitoyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016746	acyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044255	cellular lipid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044283	small molecule biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046942	carboxylic acid transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1903825	organic acid transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	33	89

External Links

No external refs found!

Lsat_1_v5_gn_3_63100.1 (TMO6, DOF5.3)

Expression Profile

Co-expression Networks

Functional Annotation