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  5. Lsat_1_v5_gn_3_49560.1

Lsat_1_v5_gn_3_49560.1


Description : not classified


Gene families : OG0015945 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_49560.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_25


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003872 6-phosphofructokinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004842 ubiquitin-protein transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006073 obsolete cellular glucan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008443 phosphofructokinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009690 cytokinin metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010817 regulation of hormone levels IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016746 acyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016755 aminoacyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019139 cytokinin dehydrogenase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019200 carbohydrate kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019787 ubiquitin-like protein transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0020037 heme binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042445 hormone metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046527 glucosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051259 protein complex oligomerization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051260 protein homooligomerization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065007 biological regulation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065008 regulation of biological quality IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001680 WD40_rpt 363 408
IPR001680 WD40_rpt 322 351
IPR001680 WD40_rpt 176 207
IPR001680 WD40_rpt 218 250
IPR001680 WD40_rpt 260 296
IPR001680 WD40_rpt 51 85
No external refs found!